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 | Acesso ao texto completo restrito à biblioteca da Embrapa Agroenergia. Para informações adicionais entre em contato com cnpae.biblioteca@embrapa.br. |
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Registro Completo |
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Biblioteca(s): |
Embrapa Agroenergia. |
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Data corrente: |
22/08/2023 |
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Data da última atualização: |
19/04/2024 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
ABREU, C. G. de; ROESCH, L. F. W.; ANDREOTE, F. D.; SILVA, S. R.; MORAES, T. S. J. de; ZIED, D. C.; SIQUEIRA, F. G. de; DIAS, E. S.; VARANI, A. M.; PYLRO, V. S. |
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Afiliação: |
CARLOS GODINHO DE ABREU, FEDERAL UNIVERSITY OF LAVRAS; LUIZ FERNANDO WURDIG ROESCH, UNIVERSITY OF FLORIDA; FERNANDO DINI ANDREOTE, “LUIZ DE QUEIROZ” COLLEGE OF AGRICULTURE, UNIVERSITY OF SÃO PAULO; SAURA RODRIGUES SILVA, UNIVERSITY OF FLORIDA; TATIANA SILVEIRA JUNQUEIRA DE MORAES, FEDERAL UNIVERSITY OF LAVRAS; DIEGO CUNHA ZIED, SÃO PAULO STATE UNIVERSITY (UNESP); FELIX GONCALVES DE SIQUEIRA, CNPAE; EUSTÁQUIO SOUZA DIAS, FEDERAL UNIVERSITY OF LAVRAS; ALESSANDRO M. VARANI, SÃO PAULO STATE UNIVERSITY (UNESP); VICTOR SATLER PYLRO, FEDERAL UNIVERSITY OF LAVRAS. |
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Título: |
Decoding the chromosome-scale genome of the nutrient-rich Agaricus subrufescens: A Resource for fungal biology and biotechnology. |
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Ano de publicação: |
2023 |
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Fonte/Imprenta: |
Research in Microbiology, v. 174, n. 8, 104116, 2023. |
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DOI: |
https://doi.org/10.1016/j.resmic.2023.104116 |
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Idioma: |
Inglês |
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Conteúdo: |
Agaricus subrufescens, also known as the "sun mushroom," has significant nutritional 27 and medicinal value. However, its short shelf life due to the browning process results 28 in post-harvest losses unless it's quickly dehydrated. This restricts its availability to 29 consumers in the form of capsules. A genome sequence of A. subrufescens may lead 30 to new cultivation alternatives or the application of gene editing strategies to delay the 31 browning process. We assembled a chromosome-scale genome using a hybrid 32 approach combining Illumina and Nanopore sequencing. The genome was assembled 33 into 13 chromosomes and 31 unplaced scaffolds, totaling 44.5 Mb with 96.5% 34 completeness and 47.24% GC content. 14,332 protein-coding genes were identified, 35 with 64.6% of the genome covered by genes and 23.41% transposable elements. The mitogenome was circularized and encoded fourteen typical mitochondrial genes. Four polyphenol oxidase (PPO) genes and the Mating-type locus were identified. Phylogenomic analysis supports the placement of A. subrufescens in the Agaricomycetes clade. This is the first available genome sequence of a strain of the "sun mushroom." Results are available through a Genome Browser (https://plantgenomics.ncc.unesp.br/gen.php?id=Asub) and can support further fungal biological and genomic studies. |
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Thesaurus Nal: |
Agaricus subrufescens. |
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Categoria do assunto: |
-- |
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Marc: |
LEADER 02153naa a2200253 a 4500
001 2156053
005 2024-04-19
008 2023 bl uuuu u00u1 u #d
024 7 $ahttps://doi.org/10.1016/j.resmic.2023.104116$2DOI
100 1 $aABREU, C. G. de
245 $aDecoding the chromosome-scale genome of the nutrient-rich Agaricus subrufescens$bA Resource for fungal biology and biotechnology.$h[electronic resource]
260 $c2023
520 $aAgaricus subrufescens, also known as the "sun mushroom," has significant nutritional 27 and medicinal value. However, its short shelf life due to the browning process results 28 in post-harvest losses unless it's quickly dehydrated. This restricts its availability to 29 consumers in the form of capsules. A genome sequence of A. subrufescens may lead 30 to new cultivation alternatives or the application of gene editing strategies to delay the 31 browning process. We assembled a chromosome-scale genome using a hybrid 32 approach combining Illumina and Nanopore sequencing. The genome was assembled 33 into 13 chromosomes and 31 unplaced scaffolds, totaling 44.5 Mb with 96.5% 34 completeness and 47.24% GC content. 14,332 protein-coding genes were identified, 35 with 64.6% of the genome covered by genes and 23.41% transposable elements. The mitogenome was circularized and encoded fourteen typical mitochondrial genes. Four polyphenol oxidase (PPO) genes and the Mating-type locus were identified. Phylogenomic analysis supports the placement of A. subrufescens in the Agaricomycetes clade. This is the first available genome sequence of a strain of the "sun mushroom." Results are available through a Genome Browser (https://plantgenomics.ncc.unesp.br/gen.php?id=Asub) and can support further fungal biological and genomic studies.
650 $aAgaricus subrufescens
700 1 $aROESCH, L. F. W.
700 1 $aANDREOTE, F. D.
700 1 $aSILVA, S. R.
700 1 $aMORAES, T. S. J. de
700 1 $aZIED, D. C.
700 1 $aSIQUEIRA, F. G. de
700 1 $aDIAS, E. S.
700 1 $aVARANI, A. M.
700 1 $aPYLRO, V. S.
773 $tResearch in Microbiology$gv. 174, n. 8, 104116, 2023.
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Registro original: |
Embrapa Agroenergia (CNPAE) |
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| Acesso ao texto completo restrito à biblioteca da Embrapa Amazônia Ocidental. Para informações adicionais entre em contato com cpaa.biblioteca@embrapa.br. |
Registro Completo
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Biblioteca(s): |
Embrapa Amazônia Ocidental. |
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Data corrente: |
04/01/2024 |
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Data da última atualização: |
19/01/2024 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
A - 3 |
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Autoria: |
SEVERO, R.; SHIBUTANI, L. J. S.; SILVA, G. F. da; GUIMARÃES, S. da S. C.; ALCÂNTARA NETO, F. de; BESERRA JUNIOR, J. E. A.; SOUZA, J. F. F. de; MELO, M. P. de. |
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Afiliação: |
ROBINSON SEVERO, UNIVERSIDADE FEDERAL DO OESTE DO PARÁ; LEANDRO JUN SOKI SHIBUTANI, UNIVERSIDADE FEDERAL DO OESTE DO PARÁ; GILVAN FERREIRA DA SILVA, CPAA; SARAH DA SILVA COSTA GUIMARÃES, UNIVERSIDADE FEDERAL DE LAVRAS; FRANCISCO DE ALCÂNTARA NETO, UNIVERSIDADE FEDERAL DO PIAUÍ; JOSÉ EVANDO AGUIAR BESERRA JUNIOR, UNIVERSIDADE FEDERAL DO PIAUÍ; JOSÉ FÁBIO FERREIRA DE SOUZA, UNIVERSIDADE FEDERAL DO PIAUÍ; MARUZANETE PEREIRA DE MELO, UNIVERSIDADE FEDERAL DO PIAUÍ. |
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Título: |
Fusarium species causing root rot and wilt in tomato in Brazil. |
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Ano de publicação: |
2024 |
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Fonte/Imprenta: |
Journal of Phytopathology, v. 172, n. 1, e13261, 2024. |
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DOI: |
10.1111/jph.13261 |
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Idioma: |
Inglês |
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Conteúdo: |
A high frequency of plants showing symptoms of wilting and root rot has been observed in tomato-producing areas in Santarém and Belterra, Pará, Brazil. These plants showed symptoms ranging from yellowing to wilting, with roots displaying reduced development and darkening of the xylem. Four fungal isolates, derived from a collection of 12 obtained from symptomatic plants, were chosen for identification using both morphological and phylogenetic species concepts. |
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Palavras-Chave: |
Aetiology; Root pathogens; Tomato. |
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Thesagro: |
Tomate. |
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Thesaurus NAL: |
Solanum lycopersicum. |
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Categoria do assunto: |
-- |
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Marc: |
LEADER 01260naa a2200277 a 4500
001 2160434
005 2024-01-19
008 2024 bl uuuu u00u1 u #d
024 7 $a10.1111/jph.13261$2DOI
100 1 $aSEVERO, R.
245 $aFusarium species causing root rot and wilt in tomato in Brazil.$h[electronic resource]
260 $c2024
520 $aA high frequency of plants showing symptoms of wilting and root rot has been observed in tomato-producing areas in Santarém and Belterra, Pará, Brazil. These plants showed symptoms ranging from yellowing to wilting, with roots displaying reduced development and darkening of the xylem. Four fungal isolates, derived from a collection of 12 obtained from symptomatic plants, were chosen for identification using both morphological and phylogenetic species concepts.
650 $aSolanum lycopersicum
650 $aTomate
653 $aAetiology
653 $aRoot pathogens
653 $aTomato
700 1 $aSHIBUTANI, L. J. S.
700 1 $aSILVA, G. F. da
700 1 $aGUIMARÃES, S. da S. C.
700 1 $aALCÂNTARA NETO, F. de
700 1 $aBESERRA JUNIOR, J. E. A.
700 1 $aSOUZA, J. F. F. de
700 1 $aMELO, M. P. de
773 $tJournal of Phytopathology$gv. 172, n. 1, e13261, 2024.
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Embrapa Amazônia Ocidental (CPAA) |
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